Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.53■□□□□ 0.08
Syne4Q8CII8 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.53■□□□□ 0.08
Syne4Q8CII8 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.53■□□□□ 0.08
Syne4Q8CII8 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.53■□□□□ 0.08
Syne4Q8CII8 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.53■□□□□ 0.08
Syne4Q8CII8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.53■□□□□ 0.08
Syne4Q8CII8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Gm11618-201ENSMUST00000117946 267 ntBASIC15.52■□□□□ 0.08
Syne4Q8CII8 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Gm16372-201ENSMUST00000073088 450 ntBASIC15.52■□□□□ 0.08
Syne4Q8CII8 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.52■□□□□ 0.08
Syne4Q8CII8 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syne4Q8CII8 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Syne4Q8CII8 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.52■□□□□ 0.07
Syne4Q8CII8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.52■□□□□ 0.07
Syne4Q8CII8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Syne4Q8CII8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Syne4Q8CII8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Syne4Q8CII8 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Syne4Q8CII8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Syne4Q8CII8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Syne4Q8CII8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Syne4Q8CII8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.51■□□□□ 0.07
Syne4Q8CII8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.51■□□□□ 0.07
Syne4Q8CII8 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.51■□□□□ 0.07
Syne4Q8CII8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.51■□□□□ 0.07
Syne4Q8CII8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syne4Q8CII8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.5■□□□□ 0.07
Syne4Q8CII8 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.5■□□□□ 0.07
Syne4Q8CII8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms