Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Gm12151-201ENSMUST00000121374 290 ntBASIC15.23■□□□□ 0.03
Trim9Q8C7M3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Gm15487-201ENSMUST00000122373 465 ntBASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.23■□□□□ 0.03
Trim9Q8C7M3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim9Q8C7M3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim9Q8C7M3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim9Q8C7M3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim9Q8C7M3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms