Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Gm21470-201ENSMUST00000187680 696 ntBASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Gm12151-201ENSMUST00000121374 290 ntBASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Gm2445-201ENSMUST00000182798 989 ntBASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Gm29741-201ENSMUST00000192667 421 ntBASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf3Q8C120 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Gm4875-201ENSMUST00000118257 786 ntBASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf3Q8C120 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms