Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp43Q8BUM9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Usp43Q8BUM9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.99□□□□□ -0.17
Usp43Q8BUM9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp43Q8BUM9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp43Q8BUM9 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Mir7684-201ENSMUST00000183858 60 ntBASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Mir8102-201ENSMUST00000184148 139 ntBASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Mir7023-201ENSMUST00000185093 64 ntBASIC13.97□□□□□ -0.17
Usp43Q8BUM9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp43Q8BUM9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Matn2-206ENSMUST00000228570 2798 ntBASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Gm9522-201ENSMUST00000182394 926 ntBASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Gm27838-201ENSMUST00000184829 128 ntBASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp43Q8BUM9 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.96□□□□□ -0.18
Usp43Q8BUM9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Usp43Q8BUM9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Usp43Q8BUM9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.96□□□□□ -0.18
Usp43Q8BUM9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Usp43Q8BUM9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Usp43Q8BUM9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Usp43Q8BUM9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 669.3 ms