Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.34□□□□□ -0.27
Rnf38Q8BI21 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Gm18737-201ENSMUST00000173594 937 ntBASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf38Q8BI21 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf38Q8BI21 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf38Q8BI21 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Gm6222-201ENSMUST00000120787 396 ntBASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf38Q8BI21 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf38Q8BI21 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf38Q8BI21 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf38Q8BI21 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Gm18889-201ENSMUST00000174284 929 ntBASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Gm29541-201ENSMUST00000191351 678 ntBASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Chchd1-203ENSMUST00000224633 557 ntBASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms