Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Samm50Q8BGH2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Samm50Q8BGH2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Samm50Q8BGH2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Samm50Q8BGH2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Samm50Q8BGH2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Gm13223-201ENSMUST00000118609 747 ntBASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Gm10275-202ENSMUST00000168697 495 ntBASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Gm10275-201ENSMUST00000092620 635 ntBASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Samm50Q8BGH2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Samm50Q8BGH2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.19■□□□□ 0.18
Samm50Q8BGH2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms