Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.63□□□□□ -0.23
Trappc6aQ78XR0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Gm5187-201ENSMUST00000117317 991 ntBASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Gm11803-201ENSMUST00000119966 444 ntBASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Gm5161-201ENSMUST00000075243 853 ntBASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trappc6aQ78XR0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Gm6152-201ENSMUST00000151704 340 ntBASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Gm18473-201ENSMUST00000220543 868 ntBASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Gm7399-201ENSMUST00000032395 858 ntBASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trappc6aQ78XR0 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms