Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Vma21Q78T54 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.24□□□□□ -0.61
Vma21Q78T54 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Vma21Q78T54 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.23□□□□□ -0.61
Vma21Q78T54 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.23□□□□□ -0.61
Vma21Q78T54 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.23□□□□□ -0.61
Vma21Q78T54 Gm15467-201ENSMUST00000120582 445 ntBASIC11.23□□□□□ -0.61
Vma21Q78T54 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.23□□□□□ -0.61
Vma21Q78T54 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.23□□□□□ -0.61
Vma21Q78T54 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Vma21Q78T54 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.23□□□□□ -0.61
Vma21Q78T54 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.23□□□□□ -0.61
Vma21Q78T54 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 BC001981-202ENSMUST00000191393 1545 ntBASIC11.23□□□□□ -0.61
Vma21Q78T54 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Vma21Q78T54 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.23□□□□□ -0.61
Vma21Q78T54 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.23□□□□□ -0.61
Vma21Q78T54 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Vma21Q78T54 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vma21Q78T54 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Vma21Q78T54 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Vma21Q78T54 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Vma21Q78T54 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Gm11745-201ENSMUST00000121669 448 ntBASIC11.22□□□□□ -0.61
Vma21Q78T54 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.22□□□□□ -0.61
Vma21Q78T54 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.22□□□□□ -0.61
Vma21Q78T54 Gm29741-201ENSMUST00000192667 421 ntBASIC11.22□□□□□ -0.61
Vma21Q78T54 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.22□□□□□ -0.61
Vma21Q78T54 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.22□□□□□ -0.61
Vma21Q78T54 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.22□□□□□ -0.61
Vma21Q78T54 Gm18049-201ENSMUST00000208909 581 ntBASIC11.22□□□□□ -0.61
Vma21Q78T54 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Vma21Q78T54 Gm18027-201ENSMUST00000218947 619 ntBASIC11.22□□□□□ -0.61
Vma21Q78T54 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.22□□□□□ -0.61
Vma21Q78T54 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.22□□□□□ -0.61
Vma21Q78T54 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Vma21Q78T54 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.22□□□□□ -0.61
Vma21Q78T54 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vma21Q78T54 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Vma21Q78T54 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Vma21Q78T54 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.21□□□□□ -0.61
Vma21Q78T54 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Vma21Q78T54 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms