Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Gm19439-201ENSMUST00000198195 2273 ntBASIC11.6□□□□□ -0.55
Rif1Q6PR54 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.6□□□□□ -0.55
Rif1Q6PR54 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Gm17391-201ENSMUST00000171036 126 ntBASIC11.6□□□□□ -0.55
Rif1Q6PR54 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.6□□□□□ -0.55
Rif1Q6PR54 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Gm17330-201ENSMUST00000221047 165 ntBASIC11.6□□□□□ -0.55
Rif1Q6PR54 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.6□□□□□ -0.55
Rif1Q6PR54 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.6□□□□□ -0.55
Rif1Q6PR54 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.6□□□□□ -0.55
Rif1Q6PR54 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Spcs1-203ENSMUST00000226374 592 ntBASIC11.6□□□□□ -0.55
Rif1Q6PR54 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.59□□□□□ -0.55
Rif1Q6PR54 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.59□□□□□ -0.55
Rif1Q6PR54 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.59□□□□□ -0.55
Rif1Q6PR54 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Gm12948-201ENSMUST00000119406 682 ntBASIC11.59□□□□□ -0.55
Rif1Q6PR54 Gm12485-201ENSMUST00000119641 291 ntBASIC11.59□□□□□ -0.55
Rif1Q6PR54 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Gm21470-201ENSMUST00000187680 696 ntBASIC11.59□□□□□ -0.55
Rif1Q6PR54 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.59□□□□□ -0.55
Rif1Q6PR54 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.59□□□□□ -0.55
Rif1Q6PR54 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms