Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Gm2810-201ENSMUST00000118681 990 ntBASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Gm18027-201ENSMUST00000218947 619 ntBASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Gm10819-201ENSMUST00000099988 561 ntBASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.61□□□□□ -0.23
Scaf4Q6PFF0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scaf4Q6PFF0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms