Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Gm45167-201ENSMUST00000208007 322 ntBASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 AV026068-213ENSMUST00000223675 1171 ntBASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf220Q6PDX6 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Gm4899-201ENSMUST00000178708 719 ntBASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf220Q6PDX6 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms