Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Gm7730-201ENSMUST00000212486 454 ntBASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Smarcc2Q6PDG5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smarcc2Q6PDG5 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
Smarcc2Q6PDG5 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smarcc2Q6PDG5 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
Smarcc2Q6PDG5 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smarcc2Q6PDG5 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smarcc2Q6PDG5 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Gm15393-201ENSMUST00000120499 219 ntBASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Gm29667-201ENSMUST00000190817 490 ntBASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcc2Q6PDG5 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Gm24694-201ENSMUST00000180054 110 ntBASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Gm27663-201ENSMUST00000184839 110 ntBASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Gm21470-201ENSMUST00000187680 696 ntBASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Gm44855-201ENSMUST00000205725 362 ntBASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Gm20445-201ENSMUST00000061905 565 ntBASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Gm2423-201ENSMUST00000074863 733 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms