Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
VcanQ62059 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.66□□□□□ -0.38
VcanQ62059 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.66□□□□□ -0.38
VcanQ62059 Gm24420-201ENSMUST00000176676 59 ntBASIC12.66□□□□□ -0.38
VcanQ62059 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.66□□□□□ -0.38
VcanQ62059 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.66□□□□□ -0.38
VcanQ62059 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VcanQ62059 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.65□□□□□ -0.38
VcanQ62059 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcanQ62059 Gm25880-201ENSMUST00000104331 132 ntBASIC12.65□□□□□ -0.38
VcanQ62059 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VcanQ62059 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VcanQ62059 Gm44967-201ENSMUST00000207047 631 ntBASIC12.65□□□□□ -0.38
VcanQ62059 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.65□□□□□ -0.38
VcanQ62059 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.65□□□□□ -0.38
VcanQ62059 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
VcanQ62059 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcanQ62059 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
VcanQ62059 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcanQ62059 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcanQ62059 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcanQ62059 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcanQ62059 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VcanQ62059 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.65□□□□□ -0.38
VcanQ62059 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
VcanQ62059 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcanQ62059 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.65□□□□□ -0.38
VcanQ62059 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VcanQ62059 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.65□□□□□ -0.38
VcanQ62059 Gm14350-201ENSMUST00000116642 640 ntBASIC12.65□□□□□ -0.38
VcanQ62059 Gm25545-201ENSMUST00000122673 323 ntBASIC12.65□□□□□ -0.38
VcanQ62059 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.65□□□□□ -0.38
VcanQ62059 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.65□□□□□ -0.38
VcanQ62059 Gm6458-201ENSMUST00000211573 635 ntBASIC12.65□□□□□ -0.38
VcanQ62059 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.65□□□□□ -0.38
VcanQ62059 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcanQ62059 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcanQ62059 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VcanQ62059 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.65□□□□□ -0.38
VcanQ62059 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcanQ62059 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.65□□□□□ -0.39
VcanQ62059 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.65□□□□□ -0.39
VcanQ62059 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.65□□□□□ -0.39
VcanQ62059 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.64□□□□□ -0.39
VcanQ62059 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
VcanQ62059 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
VcanQ62059 Gm19353-201ENSMUST00000184561 445 ntBASIC12.64□□□□□ -0.39
VcanQ62059 Gm8885-201ENSMUST00000189382 598 ntBASIC12.64□□□□□ -0.39
VcanQ62059 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.64□□□□□ -0.39
VcanQ62059 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.64□□□□□ -0.39
VcanQ62059 Gm8325-201ENSMUST00000099086 453 ntBASIC12.64□□□□□ -0.39
VcanQ62059 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.64□□□□□ -0.39
VcanQ62059 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
VcanQ62059 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
VcanQ62059 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Gm13045-201ENSMUST00000119019 712 ntBASIC12.64□□□□□ -0.39
VcanQ62059 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
VcanQ62059 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.64□□□□□ -0.39
VcanQ62059 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.64□□□□□ -0.39
VcanQ62059 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.64□□□□□ -0.39
VcanQ62059 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
VcanQ62059 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.64□□□□□ -0.39
VcanQ62059 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
VcanQ62059 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
VcanQ62059 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.64□□□□□ -0.39
VcanQ62059 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VcanQ62059 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms