Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ift88Q61371 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.27■□□□□ 0.04
Ift88Q61371 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.27■□□□□ 0.04
Ift88Q61371 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ift88Q61371 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
Ift88Q61371 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ift88Q61371 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ift88Q61371 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.27■□□□□ 0.04
Ift88Q61371 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ift88Q61371 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.27■□□□□ 0.04
Ift88Q61371 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ift88Q61371 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ift88Q61371 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ift88Q61371 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ift88Q61371 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ift88Q61371 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ift88Q61371 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ift88Q61371 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.27■□□□□ 0.03
Ift88Q61371 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ift88Q61371 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ift88Q61371 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ift88Q61371 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ift88Q61371 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ift88Q61371 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ift88Q61371 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ift88Q61371 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ift88Q61371 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ift88Q61371 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ift88Q61371 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ift88Q61371 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ift88Q61371 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ift88Q61371 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ift88Q61371 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.26■□□□□ 0.03
Ift88Q61371 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.26■□□□□ 0.03
Ift88Q61371 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ift88Q61371 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Gm13365-201ENSMUST00000121188 973 ntBASIC15.26■□□□□ 0.03
Ift88Q61371 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.26■□□□□ 0.03
Ift88Q61371 Gm9824-201ENSMUST00000178707 561 ntBASIC15.26■□□□□ 0.03
Ift88Q61371 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.26■□□□□ 0.03
Ift88Q61371 Gm6443-201ENSMUST00000203599 874 ntBASIC15.26■□□□□ 0.03
Ift88Q61371 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.26■□□□□ 0.03
Ift88Q61371 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ift88Q61371 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.26■□□□□ 0.03
Ift88Q61371 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.26■□□□□ 0.03
Ift88Q61371 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.26■□□□□ 0.03
Ift88Q61371 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Ift88Q61371 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.26■□□□□ 0.03
Ift88Q61371 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ift88Q61371 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.26■□□□□ 0.03
Ift88Q61371 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ift88Q61371 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ift88Q61371 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ift88Q61371 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ift88Q61371 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ift88Q61371 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ift88Q61371 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ift88Q61371 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ift88Q61371 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Ift88Q61371 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ift88Q61371 Mir1895-201ENSMUST00000122615 79 ntBASIC15.25■□□□□ 0.03
Ift88Q61371 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ift88Q61371 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ift88Q61371 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ift88Q61371 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ift88Q61371 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ift88Q61371 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ift88Q61371 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ift88Q61371 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ift88Q61371 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ift88Q61371 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.25■□□□□ 0.03
Ift88Q61371 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ift88Q61371 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ift88Q61371 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms