Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Slc6a4Q60857 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.1□□□□□ -0.15
Slc6a4Q60857 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.1□□□□□ -0.15
Slc6a4Q60857 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.1□□□□□ -0.15
Slc6a4Q60857 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Gm9002-201ENSMUST00000178437 499 ntBASIC14.1□□□□□ -0.15
Slc6a4Q60857 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.1□□□□□ -0.15
Slc6a4Q60857 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.1□□□□□ -0.15
Slc6a4Q60857 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.1□□□□□ -0.15
Slc6a4Q60857 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.1□□□□□ -0.15
Slc6a4Q60857 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Slc6a4Q60857 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.09□□□□□ -0.15
Slc6a4Q60857 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.09□□□□□ -0.15
Slc6a4Q60857 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Gm8463-201ENSMUST00000208573 613 ntBASIC14.09□□□□□ -0.15
Slc6a4Q60857 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Slc6a4Q60857 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.09□□□□□ -0.15
Slc6a4Q60857 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.08□□□□□ -0.15
Slc6a4Q60857 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Slc6a4Q60857 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Slc6a4Q60857 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Slc6a4Q60857 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Slc6a4Q60857 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a4Q60857 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.08□□□□□ -0.16
Slc6a4Q60857 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Slc6a4Q60857 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a4Q60857 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a4Q60857 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a4Q60857 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a4Q60857 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a4Q60857 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Slc6a4Q60857 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.08□□□□□ -0.16
Slc6a4Q60857 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms