Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Mir7085-201ENSMUST00000184353 66 ntBASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Gm27892-201ENSMUST00000185017 106 ntBASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Gm17794-201ENSMUST00000220252 955 ntBASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shroom1Q5SX79 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Gm24420-201ENSMUST00000176676 59 ntBASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Gm19078-201ENSMUST00000206311 727 ntBASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.66□□□□□ -0.06
Shroom1Q5SX79 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Gm5356-201ENSMUST00000093326 615 ntBASIC14.66□□□□□ -0.06
Shroom1Q5SX79 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shroom1Q5SX79 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.65□□□□□ -0.06
Shroom1Q5SX79 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shroom1Q5SX79 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Shroom1Q5SX79 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shroom1Q5SX79 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms