Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Gm12895-201ENSMUST00000122214 226 ntBASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Gm27867-201ENSMUST00000184778 125 ntBASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Gm5712-201ENSMUST00000199748 1043 ntBASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Gm13830-205ENSMUST00000201195 1155 ntBASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Nudt18-203ENSMUST00000228768 1578 ntBASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 CT009510.1-201ENSMUST00000227972 270 ntBASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Mxra8os-201ENSMUST00000097740 687 ntBASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Gm7901-201ENSMUST00000120430 1597 ntBASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms