Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Gm24447-201ENSMUST00000083977 338 ntBASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Gm43438-201ENSMUST00000198133 379 ntBASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Gm6983-201ENSMUST00000214912 628 ntBASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.91■□□□□ 0.14
Rc3h1Q4VGL6 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Mir1894-201ENSMUST00000122802 81 ntBASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Gm27839-201ENSMUST00000184242 106 ntBASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Mir7085-201ENSMUST00000184353 66 ntBASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Gm7287-201ENSMUST00000205267 602 ntBASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rc3h1Q4VGL6 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms