Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Gm15376-201ENSMUST00000122258 783 ntBASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Gm43094-201ENSMUST00000196549 921 ntBASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Gm28631-201ENSMUST00000190740 334 ntBASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm4Q4VBF2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm4Q4VBF2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms