Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx49Q4FZF3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.05■□□□□ 0.16
Ddx49Q4FZF3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx49Q4FZF3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx49Q4FZF3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Gm27243-201ENSMUST00000183964 521 ntBASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Mir8109-201ENSMUST00000184375 117 ntBASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Gm17383-201ENSMUST00000078739 1041 ntBASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx49Q4FZF3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Gm8810-201ENSMUST00000172895 754 ntBASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Gm38241-201ENSMUST00000192641 898 ntBASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Mir497b-201ENSMUST00000093601 125 ntBASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx49Q4FZF3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Gm19184-201ENSMUST00000196798 928 ntBASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Gm18473-201ENSMUST00000220543 868 ntBASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.02■□□□□ 0.16
Ddx49Q4FZF3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.02■□□□□ 0.15
Ddx49Q4FZF3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx49Q4FZF3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx49Q4FZF3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx49Q4FZF3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx49Q4FZF3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms