Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Gm19163-201ENSMUST00000223313 780 ntBASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.58□□□□□ -0.39
Spg11Q3UHA3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Spg11Q3UHA3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Spg11Q3UHA3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Spg11Q3UHA3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Spg11Q3UHA3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Gm25951-201ENSMUST00000175330 64 ntBASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Spg11Q3UHA3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Gm2231-201ENSMUST00000125661 612 ntBASIC12.57□□□□□ -0.4
Spg11Q3UHA3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Gm18734-201ENSMUST00000172937 808 ntBASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Gm8913-201ENSMUST00000209491 641 ntBASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Gm11637-201ENSMUST00000120601 592 ntBASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spg11Q3UHA3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms