Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Q3KNL4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Q3KNL4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Q3KNL4 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Q3KNL4 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.56□□□□□ -0.24
Q3KNL4 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Q3KNL4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Q3KNL4 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.56□□□□□ -0.24
Q3KNL4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Q3KNL4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Q3KNL4 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Q3KNL4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Q3KNL4 Gm25911-201ENSMUST00000157621 56 ntBASIC13.56□□□□□ -0.24
Q3KNL4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.56□□□□□ -0.24
Q3KNL4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Q3KNL4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Q3KNL4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Q3KNL4 Mir125a-201ENSMUST00000083545 68 ntBASIC13.56□□□□□ -0.24
Q3KNL4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Q3KNL4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Q3KNL4 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Q3KNL4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Q3KNL4 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Q3KNL4 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Q3KNL4 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Q3KNL4 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Q3KNL4 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Q3KNL4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Q3KNL4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.55□□□□□ -0.24
Q3KNL4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.55□□□□□ -0.24
Q3KNL4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.55□□□□□ -0.24
Q3KNL4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.55□□□□□ -0.24
Q3KNL4 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.55□□□□□ -0.24
Q3KNL4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Q3KNL4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.55□□□□□ -0.24
Q3KNL4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.55□□□□□ -0.24
Q3KNL4 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.55□□□□□ -0.24
Q3KNL4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.55□□□□□ -0.24
Q3KNL4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.55□□□□□ -0.24
Q3KNL4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Q3KNL4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Q3KNL4 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Q3KNL4 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Q3KNL4 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.55□□□□□ -0.24
Q3KNL4 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Q3KNL4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Q3KNL4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Q3KNL4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.54□□□□□ -0.24
Q3KNL4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.54□□□□□ -0.24
Q3KNL4 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.54□□□□□ -0.24
Q3KNL4 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Q3KNL4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Q3KNL4 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.54□□□□□ -0.24
Q3KNL4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Q3KNL4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Q3KNL4 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Q3KNL4 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Q3KNL4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Q3KNL4 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Q3KNL4 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Q3KNL4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.54□□□□□ -0.24
Q3KNL4 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.54□□□□□ -0.24
Q3KNL4 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Q3KNL4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Q3KNL4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms