Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sox9Q04887 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sox9Q04887 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.19□□□□□ -0.14
Sox9Q04887 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Gm4986-201ENSMUST00000119731 549 ntBASIC14.19□□□□□ -0.14
Sox9Q04887 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.19□□□□□ -0.14
Sox9Q04887 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.19□□□□□ -0.14
Sox9Q04887 Gm7046-201ENSMUST00000221351 977 ntBASIC14.19□□□□□ -0.14
Sox9Q04887 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.19□□□□□ -0.14
Sox9Q04887 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.19□□□□□ -0.14
Sox9Q04887 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.19□□□□□ -0.14
Sox9Q04887 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.19□□□□□ -0.14
Sox9Q04887 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox9Q04887 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox9Q04887 Efs-202ENSMUST00000227037 2540 ntBASIC14.18□□□□□ -0.14
Sox9Q04887 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox9Q04887 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Sox9Q04887 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox9Q04887 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox9Q04887 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sox9Q04887 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Sox9Q04887 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox9Q04887 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox9Q04887 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox9Q04887 Gm24990-201ENSMUST00000157406 323 ntBASIC14.18□□□□□ -0.14
Sox9Q04887 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sox9Q04887 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Sox9Q04887 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.18□□□□□ -0.14
Sox9Q04887 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Sox9Q04887 Gm37922-201ENSMUST00000195596 455 ntBASIC14.18□□□□□ -0.14
Sox9Q04887 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox9Q04887 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.18□□□□□ -0.14
Sox9Q04887 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.18□□□□□ -0.14
Sox9Q04887 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox9Q04887 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox9Q04887 Gm24447-201ENSMUST00000083977 338 ntBASIC14.18□□□□□ -0.14
Sox9Q04887 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox9Q04887 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox9Q04887 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox9Q04887 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox9Q04887 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox9Q04887 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sox9Q04887 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Sox9Q04887 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
Sox9Q04887 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox9Q04887 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox9Q04887 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.17□□□□□ -0.14
Sox9Q04887 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox9Q04887 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox9Q04887 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox9Q04887 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox9Q04887 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox9Q04887 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.17□□□□□ -0.14
Sox9Q04887 Gm22334-201ENSMUST00000158070 133 ntBASIC14.17□□□□□ -0.14
Sox9Q04887 Gm7029-201ENSMUST00000173226 450 ntBASIC14.17□□□□□ -0.14
Sox9Q04887 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.17□□□□□ -0.14
Sox9Q04887 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox9Q04887 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.17□□□□□ -0.14
Sox9Q04887 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox9Q04887 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox9Q04887 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox9Q04887 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox9Q04887 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox9Q04887 Mir497b-201ENSMUST00000093601 125 ntBASIC14.17□□□□□ -0.14
Sox9Q04887 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox9Q04887 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox9Q04887 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox9Q04887 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sox9Q04887 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox9Q04887 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox9Q04887 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sox9Q04887 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox9Q04887 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox9Q04887 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sox9Q04887 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox9Q04887 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.17□□□□□ -0.14
Sox9Q04887 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox9Q04887 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox9Q04887 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox9Q04887 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms