Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Gm28659-201ENSMUST00000188013 759 ntBASIC12.61□□□□□ -0.39
Scn1bP97952 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Scn1bP97952 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.61□□□□□ -0.39
Scn1bP97952 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Scn1bP97952 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Scn1bP97952 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.61□□□□□ -0.39
Scn1bP97952 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Scn1bP97952 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.6□□□□□ -0.39
Scn1bP97952 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Scn1bP97952 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.6□□□□□ -0.39
Scn1bP97952 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.6□□□□□ -0.39
Scn1bP97952 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.6□□□□□ -0.39
Scn1bP97952 Gm2451-201ENSMUST00000199447 999 ntBASIC12.6□□□□□ -0.39
Scn1bP97952 Gm10290-201ENSMUST00000200451 999 ntBASIC12.6□□□□□ -0.39
Scn1bP97952 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.6□□□□□ -0.39
Scn1bP97952 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Scn1bP97952 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.6□□□□□ -0.39
Scn1bP97952 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Scn1bP97952 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Scn1bP97952 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1bP97952 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Scn1bP97952 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Scn1bP97952 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.59□□□□□ -0.39
Scn1bP97952 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.59□□□□□ -0.39
Scn1bP97952 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Scn1bP97952 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 Gm10060-201ENSMUST00000212002 111 ntBASIC12.59□□□□□ -0.39
Scn1bP97952 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.59□□□□□ -0.39
Scn1bP97952 Gm9182-201ENSMUST00000217829 639 ntBASIC12.59□□□□□ -0.39
Scn1bP97952 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.59□□□□□ -0.39
Scn1bP97952 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Scn1bP97952 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.59□□□□□ -0.39
Scn1bP97952 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.59□□□□□ -0.39
Scn1bP97952 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Scn1bP97952 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.59□□□□□ -0.39
Scn1bP97952 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms