Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PrkdcP97313 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
PrkdcP97313 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC9.15□□□□□ -0.94
PrkdcP97313 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
PrkdcP97313 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PrkdcP97313 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC9.15□□□□□ -0.94
PrkdcP97313 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC9.15□□□□□ -0.94
PrkdcP97313 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
PrkdcP97313 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
PrkdcP97313 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC9.15□□□□□ -0.94
PrkdcP97313 Gm6254-201ENSMUST00000168178 1072 ntBASIC9.15□□□□□ -0.94
PrkdcP97313 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PrkdcP97313 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PrkdcP97313 AC166992.1-201ENSMUST00000216356 565 ntBASIC9.15□□□□□ -0.94
PrkdcP97313 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PrkdcP97313 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PrkdcP97313 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
PrkdcP97313 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PrkdcP97313 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
PrkdcP97313 Gm7114-201ENSMUST00000190159 1789 ntBASIC9.15□□□□□ -0.95
PrkdcP97313 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
PrkdcP97313 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
PrkdcP97313 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC9.15□□□□□ -0.95
PrkdcP97313 Gm14460-201ENSMUST00000121511 639 ntBASIC9.15□□□□□ -0.95
PrkdcP97313 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
PrkdcP97313 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC9.15□□□□□ -0.95
PrkdcP97313 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC9.15□□□□□ -0.95
PrkdcP97313 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
PrkdcP97313 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC9.15□□□□□ -0.95
PrkdcP97313 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
PrkdcP97313 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
PrkdcP97313 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
PrkdcP97313 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
PrkdcP97313 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
PrkdcP97313 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC9.14□□□□□ -0.95
PrkdcP97313 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC9.14□□□□□ -0.95
PrkdcP97313 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Gm12266-201ENSMUST00000120311 962 ntBASIC9.14□□□□□ -0.95
PrkdcP97313 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC9.14□□□□□ -0.95
PrkdcP97313 Gm14832-201ENSMUST00000121289 322 ntBASIC9.14□□□□□ -0.95
PrkdcP97313 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC9.14□□□□□ -0.95
PrkdcP97313 Daam2-202ENSMUST00000224595 1926 ntBASIC9.14□□□□□ -0.95
PrkdcP97313 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
PrkdcP97313 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Gm13600-201ENSMUST00000117949 744 ntBASIC9.14□□□□□ -0.95
PrkdcP97313 Gm12969-201ENSMUST00000120199 1004 ntBASIC9.14□□□□□ -0.95
PrkdcP97313 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC9.14□□□□□ -0.95
PrkdcP97313 Gm15547-201ENSMUST00000122152 333 ntBASIC9.14□□□□□ -0.95
PrkdcP97313 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC9.14□□□□□ -0.95
PrkdcP97313 Gm22138-201ENSMUST00000158748 128 ntBASIC9.14□□□□□ -0.95
PrkdcP97313 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
PrkdcP97313 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC9.14□□□□□ -0.95
PrkdcP97313 Gm44552-201ENSMUST00000205458 1247 ntBASIC9.14□□□□□ -0.95
PrkdcP97313 AC140375.1-201ENSMUST00000225421 694 ntBASIC9.14□□□□□ -0.95
PrkdcP97313 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
PrkdcP97313 Gm4864-201ENSMUST00000219894 1461 ntBASIC9.13□□□□□ -0.95
PrkdcP97313 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Gm17208-201ENSMUST00000168388 535 ntBASIC9.13□□□□□ -0.95
PrkdcP97313 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC9.13□□□□□ -0.95
PrkdcP97313 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC9.13□□□□□ -0.95
PrkdcP97313 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC9.13□□□□□ -0.95
PrkdcP97313 AC069562.3-201ENSMUST00000225387 587 ntBASIC9.13□□□□□ -0.95
PrkdcP97313 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Gm9996-201ENSMUST00000070359 913 ntBASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms