Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.26□□□□□ -0.45
Sf3b6P59708 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sf3b6P59708 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sf3b6P59708 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sf3b6P59708 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sf3b6P59708 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Sf3b6P59708 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Sf3b6P59708 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.25□□□□□ -0.45
Sf3b6P59708 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sf3b6P59708 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sf3b6P59708 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.25□□□□□ -0.45
Sf3b6P59708 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.25□□□□□ -0.45
Sf3b6P59708 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.25□□□□□ -0.45
Sf3b6P59708 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.25□□□□□ -0.45
Sf3b6P59708 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.25□□□□□ -0.45
Sf3b6P59708 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.25□□□□□ -0.45
Sf3b6P59708 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.25□□□□□ -0.45
Sf3b6P59708 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Sf3b6P59708 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sf3b6P59708 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.25□□□□□ -0.45
Sf3b6P59708 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sf3b6P59708 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.25□□□□□ -0.45
Sf3b6P59708 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b6P59708 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3b6P59708 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3b6P59708 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Sf3b6P59708 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3b6P59708 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3b6P59708 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Sf3b6P59708 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3b6P59708 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.24□□□□□ -0.45
Sf3b6P59708 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sf3b6P59708 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.24□□□□□ -0.45
Sf3b6P59708 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sf3b6P59708 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.24□□□□□ -0.45
Sf3b6P59708 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3b6P59708 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.24□□□□□ -0.45
Sf3b6P59708 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.24□□□□□ -0.45
Sf3b6P59708 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3b6P59708 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3b6P59708 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3b6P59708 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.24□□□□□ -0.45
Sf3b6P59708 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3b6P59708 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.24□□□□□ -0.45
Sf3b6P59708 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3b6P59708 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.24□□□□□ -0.45
Sf3b6P59708 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3b6P59708 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Sf3b6P59708 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3b6P59708 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3b6P59708 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3b6P59708 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sf3b6P59708 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Sf3b6P59708 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3b6P59708 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3b6P59708 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3b6P59708 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.24□□□□□ -0.45
Sf3b6P59708 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sf3b6P59708 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.23□□□□□ -0.45
Sf3b6P59708 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Sf3b6P59708 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sf3b6P59708 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sf3b6P59708 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sf3b6P59708 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms