Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm17971-201ENSMUST00000190239 806 ntBASIC15.39■□□□□ 0.05
Tpm1P58771 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.39■□□□□ 0.05
Tpm1P58771 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm1P58771 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm1P58771 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm1P58771 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Tpm1P58771 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.39■□□□□ 0.05
Tpm1P58771 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm1P58771 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Tpm1P58771 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm1P58771 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.39■□□□□ 0.05
Tpm1P58771 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm1P58771 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm1P58771 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm1P58771 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Tpm1P58771 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.38■□□□□ 0.05
Tpm1P58771 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tpm1P58771 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Tpm1P58771 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Tpm1P58771 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tpm1P58771 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tpm1P58771 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Tpm1P58771 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.38■□□□□ 0.05
Tpm1P58771 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tpm1P58771 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tpm1P58771 Gm11543-201ENSMUST00000120758 370 ntBASIC15.38■□□□□ 0.05
Tpm1P58771 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tpm1P58771 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.38■□□□□ 0.05
Tpm1P58771 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Tpm1P58771 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Tpm1P58771 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tpm1P58771 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tpm1P58771 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tpm1P58771 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tpm1P58771 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Tpm1P58771 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Tpm1P58771 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tpm1P58771 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tpm1P58771 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.37■□□□□ 0.05
Tpm1P58771 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.37■□□□□ 0.05
Tpm1P58771 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Tpm1P58771 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Tpm1P58771 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Tpm1P58771 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.37■□□□□ 0.05
Tpm1P58771 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.37■□□□□ 0.05
Tpm1P58771 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Tpm1P58771 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.37■□□□□ 0.05
Tpm1P58771 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Tpm1P58771 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpm1P58771 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Tpm1P58771 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpm1P58771 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpm1P58771 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpm1P58771 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.36■□□□□ 0.05
Tpm1P58771 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Tpm1P58771 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpm1P58771 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.36■□□□□ 0.05
Tpm1P58771 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Tpm1P58771 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpm1P58771 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpm1P58771 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Tpm1P58771 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.36■□□□□ 0.05
Tpm1P58771 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tpm1P58771 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.36■□□□□ 0.05
Tpm1P58771 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tpm1P58771 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpm1P58771 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpm1P58771 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpm1P58771 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Tpm1P58771 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpm1P58771 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Tpm1P58771 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tpm1P58771 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Tpm1P58771 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tpm1P58771 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tpm1P58771 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms