Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Matn2-203ENSMUST00000226766 3252 ntBASIC10.88□□□□□ -0.67
Rab4aP56371 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Rab4aP56371 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rab4aP56371 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.88□□□□□ -0.67
Rab4aP56371 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Rab4aP56371 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rab4aP56371 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rab4aP56371 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rab4aP56371 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rab4aP56371 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC10.87□□□□□ -0.67
Rab4aP56371 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.87□□□□□ -0.67
Rab4aP56371 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.87□□□□□ -0.67
Rab4aP56371 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC10.87□□□□□ -0.67
Rab4aP56371 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC10.87□□□□□ -0.67
Rab4aP56371 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Gm22240-201ENSMUST00000175225 82 ntBASIC10.87□□□□□ -0.67
Rab4aP56371 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Rab4aP56371 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Rab4aP56371 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
Rab4aP56371 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.87□□□□□ -0.67
Rab4aP56371 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab4aP56371 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Rab4aP56371 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.87□□□□□ -0.67
Rab4aP56371 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.86□□□□□ -0.67
Rab4aP56371 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rab4aP56371 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Rab4aP56371 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Rab4aP56371 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC10.86□□□□□ -0.67
Rab4aP56371 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC10.86□□□□□ -0.67
Rab4aP56371 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC10.86□□□□□ -0.67
Rab4aP56371 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Gm18622-201ENSMUST00000219361 595 ntBASIC10.86□□□□□ -0.67
Rab4aP56371 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.86□□□□□ -0.67
Rab4aP56371 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC10.86□□□□□ -0.67
Rab4aP56371 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rab4aP56371 Gm4081-201ENSMUST00000195287 1838 ntBASIC10.86□□□□□ -0.67
Rab4aP56371 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Rab4aP56371 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms