Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NcanP55066 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.43□□□□□ -0.1
NcanP55066 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NcanP55066 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NcanP55066 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.42□□□□□ -0.1
NcanP55066 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
NcanP55066 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NcanP55066 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
NcanP55066 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NcanP55066 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.42□□□□□ -0.1
NcanP55066 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NcanP55066 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NcanP55066 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NcanP55066 Gm15770-201ENSMUST00000117498 584 ntBASIC14.42□□□□□ -0.1
NcanP55066 Gm16479-201ENSMUST00000121706 932 ntBASIC14.42□□□□□ -0.1
NcanP55066 Gm20426-201ENSMUST00000173657 440 ntBASIC14.42□□□□□ -0.1
NcanP55066 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.42□□□□□ -0.1
NcanP55066 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NcanP55066 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NcanP55066 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.42□□□□□ -0.1
NcanP55066 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NcanP55066 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
NcanP55066 Gm16372-201ENSMUST00000073088 450 ntBASIC14.42□□□□□ -0.1
NcanP55066 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.42□□□□□ -0.1
NcanP55066 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.42□□□□□ -0.1
NcanP55066 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.42□□□□□ -0.1
NcanP55066 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NcanP55066 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NcanP55066 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NcanP55066 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NcanP55066 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NcanP55066 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NcanP55066 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
NcanP55066 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NcanP55066 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NcanP55066 Gm14208-201ENSMUST00000119645 678 ntBASIC14.41□□□□□ -0.1
NcanP55066 Gm14726-201ENSMUST00000120623 896 ntBASIC14.41□□□□□ -0.1
NcanP55066 Gm2231-201ENSMUST00000125661 612 ntBASIC14.41□□□□□ -0.1
NcanP55066 Gm13570-201ENSMUST00000140763 309 ntBASIC14.41□□□□□ -0.1
NcanP55066 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
NcanP55066 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NcanP55066 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.41□□□□□ -0.1
NcanP55066 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NcanP55066 Gm44967-201ENSMUST00000207047 631 ntBASIC14.41□□□□□ -0.1
NcanP55066 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.41□□□□□ -0.1
NcanP55066 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.41□□□□□ -0.1
NcanP55066 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NcanP55066 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
NcanP55066 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NcanP55066 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
NcanP55066 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NcanP55066 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NcanP55066 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NcanP55066 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NcanP55066 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.4□□□□□ -0.1
NcanP55066 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NcanP55066 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.4□□□□□ -0.1
NcanP55066 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NcanP55066 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NcanP55066 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NcanP55066 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.4□□□□□ -0.1
NcanP55066 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.4□□□□□ -0.1
NcanP55066 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
NcanP55066 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NcanP55066 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NcanP55066 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.4□□□□□ -0.1
NcanP55066 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NcanP55066 Gm25732-201ENSMUST00000175168 60 ntBASIC14.4□□□□□ -0.1
NcanP55066 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NcanP55066 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.4□□□□□ -0.1
NcanP55066 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.4□□□□□ -0.1
NcanP55066 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.4□□□□□ -0.1
NcanP55066 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
NcanP55066 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NcanP55066 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.4□□□□□ -0.1
NcanP55066 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NcanP55066 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NcanP55066 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NcanP55066 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NcanP55066 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
NcanP55066 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NcanP55066 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NcanP55066 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NcanP55066 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NcanP55066 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NcanP55066 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NcanP55066 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.39□□□□□ -0.11
NcanP55066 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
NcanP55066 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.39□□□□□ -0.11
NcanP55066 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NcanP55066 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NcanP55066 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NcanP55066 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NcanP55066 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms