Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NrlP54846 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NrlP54846 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NrlP54846 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NrlP54846 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NrlP54846 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NrlP54846 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.68□□□□□ -0.06
NrlP54846 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NrlP54846 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NrlP54846 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NrlP54846 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NrlP54846 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NrlP54846 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NrlP54846 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NrlP54846 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NrlP54846 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NrlP54846 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.68□□□□□ -0.06
NrlP54846 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NrlP54846 Gm15376-201ENSMUST00000122258 783 ntBASIC14.68□□□□□ -0.06
NrlP54846 Gm26464-201ENSMUST00000157094 305 ntBASIC14.68□□□□□ -0.06
NrlP54846 Snora78-201ENSMUST00000158630 128 ntBASIC14.68□□□□□ -0.06
NrlP54846 Gm27847-201ENSMUST00000183711 107 ntBASIC14.68□□□□□ -0.06
NrlP54846 Gm27375-201ENSMUST00000183799 107 ntBASIC14.68□□□□□ -0.06
NrlP54846 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
NrlP54846 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.68□□□□□ -0.06
NrlP54846 Gm7561-201ENSMUST00000211203 886 ntBASIC14.68□□□□□ -0.06
NrlP54846 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
NrlP54846 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
NrlP54846 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.68□□□□□ -0.06
NrlP54846 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NrlP54846 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NrlP54846 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.68□□□□□ -0.06
NrlP54846 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NrlP54846 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NrlP54846 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NrlP54846 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.68□□□□□ -0.06
NrlP54846 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NrlP54846 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NrlP54846 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NrlP54846 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.68□□□□□ -0.06
NrlP54846 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NrlP54846 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NrlP54846 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NrlP54846 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NrlP54846 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.67□□□□□ -0.06
NrlP54846 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NrlP54846 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NrlP54846 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NrlP54846 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
NrlP54846 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.67□□□□□ -0.06
NrlP54846 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.67□□□□□ -0.06
NrlP54846 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NrlP54846 Gm27772-201ENSMUST00000184900 187 ntBASIC14.67□□□□□ -0.06
NrlP54846 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.67□□□□□ -0.06
NrlP54846 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.67□□□□□ -0.06
NrlP54846 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NrlP54846 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NrlP54846 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NrlP54846 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NrlP54846 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NrlP54846 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
NrlP54846 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NrlP54846 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.66□□□□□ -0.06
NrlP54846 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.66□□□□□ -0.06
NrlP54846 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.66□□□□□ -0.06
NrlP54846 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NrlP54846 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.66□□□□□ -0.06
NrlP54846 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.66□□□□□ -0.06
NrlP54846 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NrlP54846 Gm45331-201ENSMUST00000209868 554 ntBASIC14.66□□□□□ -0.06
NrlP54846 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.66□□□□□ -0.06
NrlP54846 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NrlP54846 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.66□□□□□ -0.06
NrlP54846 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.66□□□□□ -0.06
NrlP54846 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.65□□□□□ -0.06
NrlP54846 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NrlP54846 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NrlP54846 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NrlP54846 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NrlP54846 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms