Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.31□□□□□ -0.28
Lbx1P52955 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.31□□□□□ -0.28
Lbx1P52955 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.31□□□□□ -0.28
Lbx1P52955 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.31□□□□□ -0.28
Lbx1P52955 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.31□□□□□ -0.28
Lbx1P52955 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.31□□□□□ -0.28
Lbx1P52955 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.31□□□□□ -0.28
Lbx1P52955 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Lbx1P52955 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Lbx1P52955 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Lbx1P52955 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.31□□□□□ -0.28
Lbx1P52955 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Lbx1P52955 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.3□□□□□ -0.28
Lbx1P52955 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.3□□□□□ -0.28
Lbx1P52955 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.3□□□□□ -0.28
Lbx1P52955 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.3□□□□□ -0.28
Lbx1P52955 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.3□□□□□ -0.28
Lbx1P52955 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Lbx1P52955 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.3□□□□□ -0.28
Lbx1P52955 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.3□□□□□ -0.28
Lbx1P52955 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.3□□□□□ -0.28
Lbx1P52955 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.3□□□□□ -0.28
Lbx1P52955 Gm13097-201ENSMUST00000210722 397 ntBASIC13.3□□□□□ -0.28
Lbx1P52955 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.3□□□□□ -0.28
Lbx1P52955 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.3□□□□□ -0.28
Lbx1P52955 Itm2b-204ENSMUST00000228637 783 ntBASIC13.3□□□□□ -0.28
Lbx1P52955 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Lbx1P52955 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.3□□□□□ -0.28
Lbx1P52955 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Lbx1P52955 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Lbx1P52955 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.3□□□□□ -0.28
Lbx1P52955 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Lbx1P52955 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lbx1P52955 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.29□□□□□ -0.28
Lbx1P52955 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Lbx1P52955 Gm23200-201ENSMUST00000104379 132 ntBASIC13.29□□□□□ -0.28
Lbx1P52955 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Lbx1P52955 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.29□□□□□ -0.28
Lbx1P52955 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.29□□□□□ -0.28
Lbx1P52955 Gm15276-201ENSMUST00000145953 498 ntBASIC13.29□□□□□ -0.28
Lbx1P52955 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC13.29□□□□□ -0.28
Lbx1P52955 Gm9726-201ENSMUST00000180321 678 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms