Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prox1P48437 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prox1P48437 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.27□□□□□ -0.29
Prox1P48437 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Prox1P48437 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.27□□□□□ -0.29
Prox1P48437 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prox1P48437 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prox1P48437 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Prox1P48437 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prox1P48437 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Prox1P48437 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Prox1P48437 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Prox1P48437 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.26□□□□□ -0.29
Prox1P48437 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.26□□□□□ -0.29
Prox1P48437 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.26□□□□□ -0.29
Prox1P48437 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prox1P48437 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Prox1P48437 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Prox1P48437 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.26□□□□□ -0.29
Prox1P48437 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Prox1P48437 Gm2756-201ENSMUST00000195851 400 ntBASIC13.26□□□□□ -0.29
Prox1P48437 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.26□□□□□ -0.29
Prox1P48437 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Prox1P48437 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prox1P48437 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prox1P48437 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prox1P48437 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prox1P48437 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prox1P48437 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prox1P48437 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prox1P48437 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Prox1P48437 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prox1P48437 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prox1P48437 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prox1P48437 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prox1P48437 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.26□□□□□ -0.29
Prox1P48437 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.26□□□□□ -0.29
Prox1P48437 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Prox1P48437 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Prox1P48437 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Prox1P48437 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Prox1P48437 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Prox1P48437 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.25□□□□□ -0.29
Prox1P48437 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Prox1P48437 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Prox1P48437 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 Gm9385-201ENSMUST00000117563 472 ntBASIC13.25□□□□□ -0.29
Prox1P48437 Gm14140-201ENSMUST00000119999 995 ntBASIC13.25□□□□□ -0.29
Prox1P48437 Gm6736-201ENSMUST00000166583 948 ntBASIC13.25□□□□□ -0.29
Prox1P48437 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.25□□□□□ -0.29
Prox1P48437 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.25□□□□□ -0.29
Prox1P48437 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Prox1P48437 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Prox1P48437 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Prox1P48437 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.25□□□□□ -0.29
Prox1P48437 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prox1P48437 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.25□□□□□ -0.29
Prox1P48437 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prox1P48437 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prox1P48437 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prox1P48437 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Prox1P48437 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prox1P48437 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Prox1P48437 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Prox1P48437 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prox1P48437 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.24□□□□□ -0.29
Prox1P48437 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.24□□□□□ -0.29
Prox1P48437 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prox1P48437 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prox1P48437 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prox1P48437 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prox1P48437 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Prox1P48437 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Prox1P48437 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prox1P48437 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Prox1P48437 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Prox1P48437 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.24□□□□□ -0.29
Prox1P48437 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Prox1P48437 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Prox1P48437 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.24□□□□□ -0.29
Prox1P48437 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.24□□□□□ -0.29
Prox1P48437 Gm15483-201ENSMUST00000120338 456 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms