Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.26□□□□□ -0.29
Sox18P43680 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.26□□□□□ -0.29
Sox18P43680 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.26□□□□□ -0.29
Sox18P43680 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sox18P43680 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.26□□□□□ -0.29
Sox18P43680 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sox18P43680 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sox18P43680 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox18P43680 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox18P43680 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox18P43680 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox18P43680 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox18P43680 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox18P43680 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox18P43680 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox18P43680 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox18P43680 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sox18P43680 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox18P43680 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Sox18P43680 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.25□□□□□ -0.29
Sox18P43680 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sox18P43680 Gm15957-201ENSMUST00000118893 974 ntBASIC13.25□□□□□ -0.29
Sox18P43680 Gm11803-201ENSMUST00000119966 444 ntBASIC13.25□□□□□ -0.29
Sox18P43680 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.25□□□□□ -0.29
Sox18P43680 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox18P43680 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.25□□□□□ -0.29
Sox18P43680 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox18P43680 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.25□□□□□ -0.29
Sox18P43680 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox18P43680 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox18P43680 Gm17917-201ENSMUST00000218561 953 ntBASIC13.25□□□□□ -0.29
Sox18P43680 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox18P43680 AC125539.1-201ENSMUST00000227423 622 ntBASIC13.25□□□□□ -0.29
Sox18P43680 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox18P43680 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Sox18P43680 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox18P43680 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sox18P43680 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sox18P43680 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox18P43680 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox18P43680 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Sox18P43680 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox18P43680 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox18P43680 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox18P43680 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sox18P43680 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sox18P43680 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Sox18P43680 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Gm22018-201ENSMUST00000104357 131 ntBASIC13.24□□□□□ -0.29
Sox18P43680 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sox18P43680 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.24□□□□□ -0.29
Sox18P43680 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Gm28923-201ENSMUST00000187755 322 ntBASIC13.24□□□□□ -0.29
Sox18P43680 Gm38341-201ENSMUST00000195357 515 ntBASIC13.24□□□□□ -0.29
Sox18P43680 Gm44397-201ENSMUST00000195950 113 ntBASIC13.24□□□□□ -0.29
Sox18P43680 Gm42627-201ENSMUST00000197347 224 ntBASIC13.24□□□□□ -0.29
Sox18P43680 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC13.24□□□□□ -0.29
Sox18P43680 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Sox18P43680 AC140209.1-201ENSMUST00000227875 284 ntBASIC13.24□□□□□ -0.29
Sox18P43680 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Sox18P43680 Mir433-201ENSMUST00000093564 124 ntBASIC13.24□□□□□ -0.29
Sox18P43680 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.24□□□□□ -0.29
Sox18P43680 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Sox18P43680 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sox18P43680 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.24□□□□□ -0.29
Sox18P43680 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sox18P43680 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Sox18P43680 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sox18P43680 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Sox18P43680 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox18P43680 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms