Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tnfsf4P43488 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tnfsf4P43488 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Gm25925-201ENSMUST00000158314 306 ntBASIC13.33□□□□□ -0.28
Tnfsf4P43488 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.33□□□□□ -0.28
Tnfsf4P43488 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.33□□□□□ -0.28
Tnfsf4P43488 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.33□□□□□ -0.28
Tnfsf4P43488 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsf4P43488 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.32□□□□□ -0.28
Tnfsf4P43488 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.32□□□□□ -0.28
Tnfsf4P43488 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Gm25287-201ENSMUST00000103846 110 ntBASIC13.32□□□□□ -0.28
Tnfsf4P43488 Gm22918-201ENSMUST00000103855 110 ntBASIC13.32□□□□□ -0.28
Tnfsf4P43488 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Gm44719-201ENSMUST00000206404 149 ntBASIC13.32□□□□□ -0.28
Tnfsf4P43488 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Tnfsf4P43488 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf4P43488 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.31□□□□□ -0.28
Tnfsf4P43488 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.31□□□□□ -0.28
Tnfsf4P43488 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Gm5566-201ENSMUST00000116118 459 ntBASIC13.31□□□□□ -0.28
Tnfsf4P43488 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Gm9719-201ENSMUST00000162765 543 ntBASIC13.31□□□□□ -0.28
Tnfsf4P43488 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Gm18766-201ENSMUST00000189811 808 ntBASIC13.31□□□□□ -0.28
Tnfsf4P43488 Gm6443-201ENSMUST00000203599 874 ntBASIC13.31□□□□□ -0.28
Tnfsf4P43488 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms