Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Gm27772-201ENSMUST00000184900 187 ntBASIC12.65□□□□□ -0.38
Nkx2-2P42586 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Gm17795-201ENSMUST00000214505 757 ntBASIC12.65□□□□□ -0.38
Nkx2-2P42586 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.65□□□□□ -0.38
Nkx2-2P42586 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.65□□□□□ -0.38
Nkx2-2P42586 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.65□□□□□ -0.38
Nkx2-2P42586 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nkx2-2P42586 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.64□□□□□ -0.39
Nkx2-2P42586 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Gm15321-201ENSMUST00000121290 288 ntBASIC12.64□□□□□ -0.39
Nkx2-2P42586 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.64□□□□□ -0.39
Nkx2-2P42586 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-2P42586 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.64□□□□□ -0.39
Nkx2-2P42586 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Syt7-204ENSMUST00000223586 1344 ntBASIC12.63□□□□□ -0.39
Nkx2-2P42586 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nkx2-2P42586 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms