Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mmp3P28862 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mmp3P28862 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.73□□□□□ -0.05
Mmp3P28862 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mmp3P28862 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mmp3P28862 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mmp3P28862 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mmp3P28862 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.73□□□□□ -0.05
Mmp3P28862 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Mmp3P28862 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mmp3P28862 Gm8598-201ENSMUST00000221184 836 ntBASIC14.73□□□□□ -0.05
Mmp3P28862 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mmp3P28862 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mmp3P28862 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mmp3P28862 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.73□□□□□ -0.05
Mmp3P28862 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mmp3P28862 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.73□□□□□ -0.05
Mmp3P28862 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mmp3P28862 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mmp3P28862 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.73□□□□□ -0.05
Mmp3P28862 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Mmp3P28862 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Mmp3P28862 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mmp3P28862 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Mmp3P28862 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mmp3P28862 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.72□□□□□ -0.05
Mmp3P28862 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.72□□□□□ -0.05
Mmp3P28862 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.72□□□□□ -0.05
Mmp3P28862 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Mmp3P28862 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Mmp3P28862 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.72□□□□□ -0.05
Mmp3P28862 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.72□□□□□ -0.05
Mmp3P28862 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Mmp3P28862 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Mmp3P28862 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.72□□□□□ -0.05
Mmp3P28862 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Gm6152-201ENSMUST00000151704 340 ntBASIC14.72□□□□□ -0.05
Mmp3P28862 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Mmp3P28862 Gm29127-201ENSMUST00000188304 517 ntBASIC14.72□□□□□ -0.05
Mmp3P28862 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.72□□□□□ -0.05
Mmp3P28862 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Mmp3P28862 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Mmp3P28862 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Mmp3P28862 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mmp3P28862 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Mmp3P28862 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mmp3P28862 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.71□□□□□ -0.05
Mmp3P28862 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.71□□□□□ -0.05
Mmp3P28862 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mmp3P28862 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Mmp3P28862 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mmp3P28862 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.71□□□□□ -0.05
Mmp3P28862 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.71□□□□□ -0.05
Mmp3P28862 Gm11803-201ENSMUST00000119966 444 ntBASIC14.71□□□□□ -0.05
Mmp3P28862 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.71□□□□□ -0.05
Mmp3P28862 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.71□□□□□ -0.05
Mmp3P28862 Gm12403-201ENSMUST00000121384 959 ntBASIC14.71□□□□□ -0.05
Mmp3P28862 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.71□□□□□ -0.05
Mmp3P28862 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mmp3P28862 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.71□□□□□ -0.05
Mmp3P28862 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.71□□□□□ -0.05
Mmp3P28862 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.71□□□□□ -0.05
Mmp3P28862 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.71□□□□□ -0.05
Mmp3P28862 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mmp3P28862 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.71□□□□□ -0.05
Mmp3P28862 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.71□□□□□ -0.05
Mmp3P28862 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.71□□□□□ -0.05
Mmp3P28862 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mmp3P28862 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mmp3P28862 Gm9899-201ENSMUST00000065519 555 ntBASIC14.71□□□□□ -0.05
Mmp3P28862 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mmp3P28862 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mmp3P28862 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mmp3P28862 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mmp3P28862 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mmp3P28862 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms