Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nfkb1P25799 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.18□□□□□ -0.14
Nfkb1P25799 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.18□□□□□ -0.14
Nfkb1P25799 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.18□□□□□ -0.14
Nfkb1P25799 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.18□□□□□ -0.14
Nfkb1P25799 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nfkb1P25799 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Nfkb1P25799 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nfkb1P25799 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nfkb1P25799 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.18□□□□□ -0.14
Nfkb1P25799 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Nfkb1P25799 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Nfkb1P25799 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nfkb1P25799 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nfkb1P25799 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.17□□□□□ -0.14
Nfkb1P25799 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.17□□□□□ -0.14
Nfkb1P25799 Gm26464-201ENSMUST00000157094 305 ntBASIC14.17□□□□□ -0.14
Nfkb1P25799 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.17□□□□□ -0.14
Nfkb1P25799 Gm27772-201ENSMUST00000184900 187 ntBASIC14.17□□□□□ -0.14
Nfkb1P25799 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nfkb1P25799 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nfkb1P25799 Gm25857-201ENSMUST00000082788 129 ntBASIC14.17□□□□□ -0.14
Nfkb1P25799 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Nfkb1P25799 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nfkb1P25799 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Nfkb1P25799 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Nfkb1P25799 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Nfkb1P25799 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nfkb1P25799 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nfkb1P25799 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nfkb1P25799 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Nfkb1P25799 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nfkb1P25799 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nfkb1P25799 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nfkb1P25799 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nfkb1P25799 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.16□□□□□ -0.14
Nfkb1P25799 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nfkb1P25799 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.16□□□□□ -0.14
Nfkb1P25799 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nfkb1P25799 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nfkb1P25799 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.16□□□□□ -0.14
Nfkb1P25799 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
Nfkb1P25799 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nfkb1P25799 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nfkb1P25799 Gm5356-201ENSMUST00000093326 615 ntBASIC14.16□□□□□ -0.14
Nfkb1P25799 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nfkb1P25799 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nfkb1P25799 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nfkb1P25799 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nfkb1P25799 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Nfkb1P25799 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nfkb1P25799 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nfkb1P25799 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nfkb1P25799 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nfkb1P25799 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nfkb1P25799 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nfkb1P25799 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.15□□□□□ -0.14
Nfkb1P25799 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms