Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Clk1P22518 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.92□□□□□ -0.34
Clk1P22518 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Clk1P22518 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Clk1P22518 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.92□□□□□ -0.34
Clk1P22518 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Clk1P22518 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.91□□□□□ -0.34
Clk1P22518 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.91□□□□□ -0.34
Clk1P22518 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Clk1P22518 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Clk1P22518 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Gm14701-201ENSMUST00000117156 348 ntBASIC12.91□□□□□ -0.34
Clk1P22518 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.91□□□□□ -0.34
Clk1P22518 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.91□□□□□ -0.34
Clk1P22518 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.91□□□□□ -0.34
Clk1P22518 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.91□□□□□ -0.34
Clk1P22518 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Clk1P22518 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.91□□□□□ -0.34
Clk1P22518 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Clk1P22518 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clk1P22518 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.9□□□□□ -0.34
Clk1P22518 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Clk1P22518 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Clk1P22518 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Clk1P22518 Gm15653-201ENSMUST00000119247 907 ntBASIC12.9□□□□□ -0.34
Clk1P22518 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.9□□□□□ -0.34
Clk1P22518 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Clk1P22518 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clk1P22518 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Clk1P22518 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Clk1P22518 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.89□□□□□ -0.35
Clk1P22518 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms