Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prim1P20664 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Prim1P20664 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prim1P20664 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prim1P20664 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.54■□□□□ 0.4
Prim1P20664 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC17.54■□□□□ 0.4
Prim1P20664 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.54■□□□□ 0.4
Prim1P20664 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.54■□□□□ 0.4
Prim1P20664 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Prim1P20664 Gm38223-201ENSMUST00000194484 695 ntBASIC17.54■□□□□ 0.4
Prim1P20664 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Prim1P20664 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC17.54■□□□□ 0.4
Prim1P20664 Gm7561-201ENSMUST00000211203 886 ntBASIC17.54■□□□□ 0.4
Prim1P20664 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.54■□□□□ 0.4
Prim1P20664 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prim1P20664 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prim1P20664 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prim1P20664 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prim1P20664 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prim1P20664 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC17.54■□□□□ 0.4
Prim1P20664 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prim1P20664 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Prim1P20664 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prim1P20664 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prim1P20664 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.54■□□□□ 0.4
Prim1P20664 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prim1P20664 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Prim1P20664 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prim1P20664 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prim1P20664 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Prim1P20664 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prim1P20664 AC114008.2-201ENSMUST00000227699 1347 ntBASIC17.53■□□□□ 0.4
Prim1P20664 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.53■□□□□ 0.4
Prim1P20664 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
Prim1P20664 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Prim1P20664 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prim1P20664 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prim1P20664 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prim1P20664 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prim1P20664 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prim1P20664 Gm44799-201ENSMUST00000207639 1202 ntBASIC17.53■□□□□ 0.4
Prim1P20664 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.53■□□□□ 0.4
Prim1P20664 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC17.53■□□□□ 0.4
Prim1P20664 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prim1P20664 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prim1P20664 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prim1P20664 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prim1P20664 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Prim1P20664 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prim1P20664 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Prim1P20664 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Prim1P20664 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prim1P20664 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prim1P20664 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prim1P20664 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prim1P20664 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prim1P20664 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prim1P20664 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prim1P20664 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Prim1P20664 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC17.52■□□□□ 0.4
Prim1P20664 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Prim1P20664 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prim1P20664 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prim1P20664 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Prim1P20664 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prim1P20664 Gm12537-201ENSMUST00000119266 1002 ntBASIC17.52■□□□□ 0.4
Prim1P20664 Gm15824-201ENSMUST00000119516 955 ntBASIC17.52■□□□□ 0.4
Prim1P20664 Gm12070-201ENSMUST00000119551 1002 ntBASIC17.52■□□□□ 0.4
Prim1P20664 Gm12671-201ENSMUST00000119978 1002 ntBASIC17.52■□□□□ 0.4
Prim1P20664 Gm13292-201ENSMUST00000120014 1000 ntBASIC17.52■□□□□ 0.4
Prim1P20664 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prim1P20664 Gm12403-201ENSMUST00000121384 959 ntBASIC17.52■□□□□ 0.4
Prim1P20664 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prim1P20664 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC17.52■□□□□ 0.4
Prim1P20664 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prim1P20664 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prim1P20664 Gm10359-201ENSMUST00000180167 1002 ntBASIC17.52■□□□□ 0.4
Prim1P20664 Gm12033-201ENSMUST00000180654 1002 ntBASIC17.52■□□□□ 0.4
Prim1P20664 Gm5559-201ENSMUST00000180755 1002 ntBASIC17.52■□□□□ 0.4
Prim1P20664 Gm4335-201ENSMUST00000182581 1004 ntBASIC17.52■□□□□ 0.4
Prim1P20664 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC17.52■□□□□ 0.4
Prim1P20664 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC17.52■□□□□ 0.4
Prim1P20664 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prim1P20664 Gm44397-201ENSMUST00000195950 113 ntBASIC17.52■□□□□ 0.4
Prim1P20664 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC17.52■□□□□ 0.4
Prim1P20664 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prim1P20664 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prim1P20664 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prim1P20664 Gm10012-201ENSMUST00000078252 192 ntBASIC17.52■□□□□ 0.4
Prim1P20664 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prim1P20664 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prim1P20664 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.52■□□□□ 0.4
Prim1P20664 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prim1P20664 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prim1P20664 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prim1P20664 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prim1P20664 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Prim1P20664 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Prim1P20664 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prim1P20664 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms