Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PrnpP04925 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PrnpP04925 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PrnpP04925 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PrnpP04925 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PrnpP04925 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PrnpP04925 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PrnpP04925 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PrnpP04925 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PrnpP04925 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
PrnpP04925 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PrnpP04925 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PrnpP04925 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PrnpP04925 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PrnpP04925 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PrnpP04925 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.23□□□□□ -0.13
PrnpP04925 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PrnpP04925 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PrnpP04925 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PrnpP04925 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PrnpP04925 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.23□□□□□ -0.13
PrnpP04925 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.23□□□□□ -0.13
PrnpP04925 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.23□□□□□ -0.13
PrnpP04925 Gm9257-201ENSMUST00000221254 232 ntBASIC14.23□□□□□ -0.13
PrnpP04925 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PrnpP04925 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PrnpP04925 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PrnpP04925 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PrnpP04925 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PrnpP04925 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PrnpP04925 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PrnpP04925 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PrnpP04925 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PrnpP04925 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.23□□□□□ -0.13
PrnpP04925 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PrnpP04925 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PrnpP04925 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PrnpP04925 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
PrnpP04925 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PrnpP04925 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PrnpP04925 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
PrnpP04925 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PrnpP04925 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.22□□□□□ -0.13
PrnpP04925 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PrnpP04925 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PrnpP04925 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PrnpP04925 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.22□□□□□ -0.13
PrnpP04925 Gm19309-201ENSMUST00000218295 205 ntBASIC14.22□□□□□ -0.13
PrnpP04925 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.22□□□□□ -0.13
PrnpP04925 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.22□□□□□ -0.13
PrnpP04925 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
PrnpP04925 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PrnpP04925 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
PrnpP04925 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PrnpP04925 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PrnpP04925 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PrnpP04925 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PrnpP04925 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PrnpP04925 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
PrnpP04925 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PrnpP04925 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PrnpP04925 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.21□□□□□ -0.13
PrnpP04925 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.21□□□□□ -0.13
PrnpP04925 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.21□□□□□ -0.13
PrnpP04925 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.21□□□□□ -0.13
PrnpP04925 Gm38002-201ENSMUST00000193255 180 ntBASIC14.21□□□□□ -0.13
PrnpP04925 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PrnpP04925 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.21□□□□□ -0.13
PrnpP04925 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PrnpP04925 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.21□□□□□ -0.13
PrnpP04925 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PrnpP04925 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PrnpP04925 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
PrnpP04925 Gm16372-201ENSMUST00000073088 450 ntBASIC14.21□□□□□ -0.13
PrnpP04925 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PrnpP04925 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PrnpP04925 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
PrnpP04925 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms