Protein–RNA interactions for Protein: P01942

Hba, Hemoglobin subunit alpha, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HbaP01942 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.99□□□□□ -0.33
HbaP01942 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HbaP01942 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
HbaP01942 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HbaP01942 Gm27622-201ENSMUST00000183779 60 ntBASIC12.99□□□□□ -0.33
HbaP01942 Gm27533-201ENSMUST00000183800 152 ntBASIC12.99□□□□□ -0.33
HbaP01942 Gm2756-201ENSMUST00000195851 400 ntBASIC12.99□□□□□ -0.33
HbaP01942 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.99□□□□□ -0.33
HbaP01942 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HbaP01942 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HbaP01942 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HbaP01942 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HbaP01942 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HbaP01942 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
HbaP01942 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HbaP01942 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HbaP01942 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HbaP01942 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HbaP01942 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
HbaP01942 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HbaP01942 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HbaP01942 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HbaP01942 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.98□□□□□ -0.33
HbaP01942 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
HbaP01942 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
HbaP01942 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.98□□□□□ -0.33
HbaP01942 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.98□□□□□ -0.33
HbaP01942 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
HbaP01942 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
HbaP01942 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.98□□□□□ -0.33
HbaP01942 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
HbaP01942 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HbaP01942 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HbaP01942 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HbaP01942 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HbaP01942 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HbaP01942 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HbaP01942 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HbaP01942 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HbaP01942 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HbaP01942 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HbaP01942 Gm8410-201ENSMUST00000117225 605 ntBASIC12.97□□□□□ -0.33
HbaP01942 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.97□□□□□ -0.33
HbaP01942 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HbaP01942 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
HbaP01942 Gm21470-201ENSMUST00000187680 696 ntBASIC12.97□□□□□ -0.33
HbaP01942 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HbaP01942 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.97□□□□□ -0.33
HbaP01942 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.97□□□□□ -0.33
HbaP01942 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HbaP01942 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HbaP01942 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HbaP01942 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HbaP01942 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HbaP01942 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
HbaP01942 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HbaP01942 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HbaP01942 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HbaP01942 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HbaP01942 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HbaP01942 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.97□□□□□ -0.33
HbaP01942 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
HbaP01942 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
HbaP01942 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.96□□□□□ -0.33
HbaP01942 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
HbaP01942 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HbaP01942 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HbaP01942 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
HbaP01942 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.96□□□□□ -0.33
HbaP01942 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.96□□□□□ -0.33
HbaP01942 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.96□□□□□ -0.33
HbaP01942 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.96□□□□□ -0.33
HbaP01942 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HbaP01942 Gm25925-201ENSMUST00000158314 306 ntBASIC12.96□□□□□ -0.33
HbaP01942 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.96□□□□□ -0.33
HbaP01942 Gm2213-201ENSMUST00000197485 688 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms