Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ifna1P01572 Gm6973-201ENSMUST00000117080 721 ntBASIC11.63□□□□□ -0.55
Ifna1P01572 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ifna1P01572 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.63□□□□□ -0.55
Ifna1P01572 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ifna1P01572 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
Ifna1P01572 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ifna1P01572 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ifna1P01572 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ifna1P01572 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.63□□□□□ -0.55
Ifna1P01572 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.63□□□□□ -0.55
Ifna1P01572 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.63□□□□□ -0.55
Ifna1P01572 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.63□□□□□ -0.55
Ifna1P01572 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.63□□□□□ -0.55
Ifna1P01572 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ifna1P01572 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ifna1P01572 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ifna1P01572 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ifna1P01572 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ifna1P01572 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ifna1P01572 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ifna1P01572 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ifna1P01572 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ifna1P01572 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ifna1P01572 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.63□□□□□ -0.55
Ifna1P01572 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ifna1P01572 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ifna1P01572 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ifna1P01572 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Ifna1P01572 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ifna1P01572 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ifna1P01572 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ifna1P01572 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ifna1P01572 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Ifna1P01572 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.62□□□□□ -0.55
Ifna1P01572 Rpph1-201ENSMUST00000175096 319 ntBASIC11.62□□□□□ -0.55
Ifna1P01572 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.62□□□□□ -0.55
Ifna1P01572 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.62□□□□□ -0.55
Ifna1P01572 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Ifna1P01572 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.62□□□□□ -0.55
Ifna1P01572 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Ifna1P01572 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.62□□□□□ -0.55
Ifna1P01572 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Ifna1P01572 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ifna1P01572 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ifna1P01572 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ifna1P01572 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ifna1P01572 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ifna1P01572 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ifna1P01572 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ifna1P01572 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Ifna1P01572 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ifna1P01572 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ifna1P01572 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ifna1P01572 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.61□□□□□ -0.55
Ifna1P01572 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ifna1P01572 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.61□□□□□ -0.55
Ifna1P01572 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ifna1P01572 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.61□□□□□ -0.55
Ifna1P01572 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ifna1P01572 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
Ifna1P01572 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.61□□□□□ -0.55
Ifna1P01572 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ifna1P01572 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms