Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.19□□□□□ -0.3
Vti1bO88384 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Gm5867-201ENSMUST00000063197 592 ntBASIC13.19□□□□□ -0.3
Vti1bO88384 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Vti1bO88384 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vti1bO88384 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vti1bO88384 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.18□□□□□ -0.3
Vti1bO88384 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Vti1bO88384 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.18□□□□□ -0.3
Vti1bO88384 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Vti1bO88384 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC13.18□□□□□ -0.3
Vti1bO88384 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.18□□□□□ -0.3
Vti1bO88384 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.18□□□□□ -0.3
Vti1bO88384 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Vti1bO88384 Gm9824-201ENSMUST00000178707 561 ntBASIC13.18□□□□□ -0.3
Vti1bO88384 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.18□□□□□ -0.3
Vti1bO88384 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Gm18049-201ENSMUST00000208909 581 ntBASIC13.18□□□□□ -0.3
Vti1bO88384 Gm18041-201ENSMUST00000218210 618 ntBASIC13.18□□□□□ -0.3
Vti1bO88384 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.18□□□□□ -0.3
Vti1bO88384 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Vti1bO88384 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.18□□□□□ -0.3
Vti1bO88384 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vti1bO88384 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.18□□□□□ -0.3
Vti1bO88384 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.18□□□□□ -0.3
Vti1bO88384 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1bO88384 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.17□□□□□ -0.3
Vti1bO88384 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.17□□□□□ -0.3
Vti1bO88384 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.17□□□□□ -0.3
Vti1bO88384 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vti1bO88384 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vti1bO88384 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Gm13015-201ENSMUST00000118674 204 ntBASIC13.17□□□□□ -0.3
Vti1bO88384 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.17□□□□□ -0.3
Vti1bO88384 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.17□□□□□ -0.3
Vti1bO88384 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vti1bO88384 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.17□□□□□ -0.3
Vti1bO88384 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.17□□□□□ -0.3
Vti1bO88384 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vti1bO88384 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vti1bO88384 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1bO88384 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.16□□□□□ -0.3
Vti1bO88384 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms