Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC17.35■□□□□ 0.37
Vamp4O70480 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vamp4O70480 Gm6745-201ENSMUST00000199216 526 ntBASIC17.35■□□□□ 0.37
Vamp4O70480 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC17.35■□□□□ 0.37
Vamp4O70480 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vamp4O70480 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vamp4O70480 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vamp4O70480 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.35■□□□□ 0.37
Vamp4O70480 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.35■□□□□ 0.37
Vamp4O70480 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vamp4O70480 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vamp4O70480 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vamp4O70480 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vamp4O70480 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vamp4O70480 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vamp4O70480 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vamp4O70480 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Vamp4O70480 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vamp4O70480 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vamp4O70480 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Vamp4O70480 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vamp4O70480 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vamp4O70480 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vamp4O70480 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vamp4O70480 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vamp4O70480 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.34■□□□□ 0.37
Vamp4O70480 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.34■□□□□ 0.37
Vamp4O70480 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC17.34■□□□□ 0.37
Vamp4O70480 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vamp4O70480 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.34■□□□□ 0.37
Vamp4O70480 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.34■□□□□ 0.37
Vamp4O70480 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Vamp4O70480 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC17.34■□□□□ 0.37
Vamp4O70480 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.34■□□□□ 0.37
Vamp4O70480 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Vamp4O70480 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vamp4O70480 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vamp4O70480 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Vamp4O70480 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vamp4O70480 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vamp4O70480 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vamp4O70480 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vamp4O70480 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Vamp4O70480 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Vamp4O70480 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vamp4O70480 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Vamp4O70480 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vamp4O70480 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vamp4O70480 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vamp4O70480 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vamp4O70480 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Vamp4O70480 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vamp4O70480 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vamp4O70480 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Vamp4O70480 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vamp4O70480 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.33■□□□□ 0.36
Vamp4O70480 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.33■□□□□ 0.36
Vamp4O70480 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vamp4O70480 Gm2495-201ENSMUST00000191160 466 ntBASIC17.33■□□□□ 0.36
Vamp4O70480 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vamp4O70480 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vamp4O70480 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Vamp4O70480 Gm17870-201ENSMUST00000219489 1174 ntBASIC17.33■□□□□ 0.36
Vamp4O70480 AC155252.1-201ENSMUST00000226462 1208 ntBASIC17.33■□□□□ 0.36
Vamp4O70480 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vamp4O70480 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vamp4O70480 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Vamp4O70480 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Vamp4O70480 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.33■□□□□ 0.36
Vamp4O70480 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vamp4O70480 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vamp4O70480 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vamp4O70480 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vamp4O70480 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vamp4O70480 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.33■□□□□ 0.36
Vamp4O70480 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vamp4O70480 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vamp4O70480 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vamp4O70480 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vamp4O70480 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC17.32■□□□□ 0.36
Vamp4O70480 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Vamp4O70480 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vamp4O70480 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Vamp4O70480 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vamp4O70480 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Vamp4O70480 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC17.32■□□□□ 0.36
Vamp4O70480 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vamp4O70480 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.32■□□□□ 0.36
Vamp4O70480 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Vamp4O70480 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Vamp4O70480 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.32■□□□□ 0.36
Vamp4O70480 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vamp4O70480 Gm27701-201ENSMUST00000184498 110 ntBASIC17.32■□□□□ 0.36
Vamp4O70480 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC17.32■□□□□ 0.36
Vamp4O70480 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vamp4O70480 Gm3695-201ENSMUST00000087222 1009 ntBASIC17.32■□□□□ 0.36
Vamp4O70480 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vamp4O70480 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vamp4O70480 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vamp4O70480 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms