Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC10.88□□□□□ -0.67
Pde6dO55057 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC10.88□□□□□ -0.67
Pde6dO55057 Gm43332-201ENSMUST00000202511 1044 ntBASIC10.88□□□□□ -0.67
Pde6dO55057 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Pde6dO55057 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC10.88□□□□□ -0.67
Pde6dO55057 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC10.88□□□□□ -0.67
Pde6dO55057 Gm10355-201ENSMUST00000097146 517 ntBASIC10.88□□□□□ -0.67
Pde6dO55057 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Pde6dO55057 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Pde6dO55057 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 AC119177.1-201ENSMUST00000227647 1332 ntBASIC10.87□□□□□ -0.67
Pde6dO55057 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.87□□□□□ -0.67
Pde6dO55057 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC10.87□□□□□ -0.67
Pde6dO55057 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC10.87□□□□□ -0.67
Pde6dO55057 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC10.87□□□□□ -0.67
Pde6dO55057 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC10.87□□□□□ -0.67
Pde6dO55057 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Best4-ps-201ENSMUST00000129783 1380 ntBASIC10.87□□□□□ -0.67
Pde6dO55057 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Pde6dO55057 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Pde6dO55057 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Pde6dO55057 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC10.87□□□□□ -0.67
Pde6dO55057 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pde6dO55057 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.86□□□□□ -0.67
Pde6dO55057 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Pde6dO55057 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 Gm7935-201ENSMUST00000100555 1278 ntBASIC10.86□□□□□ -0.67
Pde6dO55057 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 Gm11764-201ENSMUST00000120221 623 ntBASIC10.86□□□□□ -0.67
Pde6dO55057 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Pde6dO55057 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 Gm13830-205ENSMUST00000201195 1155 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms