Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.85□□□□□ -0.03
Nr1i3O35627 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.85□□□□□ -0.03
Nr1i3O35627 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.85□□□□□ -0.03
Nr1i3O35627 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.85□□□□□ -0.03
Nr1i3O35627 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.85□□□□□ -0.03
Nr1i3O35627 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Nr1i3O35627 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nr1i3O35627 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Nr1i3O35627 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Nr1i3O35627 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Nr1i3O35627 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nr1i3O35627 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.85□□□□□ -0.03
Nr1i3O35627 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1i3O35627 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1i3O35627 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1i3O35627 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1i3O35627 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1i3O35627 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1i3O35627 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1i3O35627 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.84□□□□□ -0.03
Nr1i3O35627 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.84□□□□□ -0.03
Nr1i3O35627 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.84□□□□□ -0.03
Nr1i3O35627 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.84□□□□□ -0.03
Nr1i3O35627 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1i3O35627 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.84□□□□□ -0.03
Nr1i3O35627 Gm8927-201ENSMUST00000181978 981 ntBASIC14.84□□□□□ -0.03
Nr1i3O35627 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nr1i3O35627 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1i3O35627 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1i3O35627 Gm3222-201ENSMUST00000071282 990 ntBASIC14.84□□□□□ -0.03
Nr1i3O35627 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Nr1i3O35627 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1i3O35627 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.84□□□□□ -0.03
Nr1i3O35627 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1i3O35627 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1i3O35627 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1i3O35627 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1i3O35627 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1i3O35627 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1i3O35627 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nr1i3O35627 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Nr1i3O35627 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nr1i3O35627 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nr1i3O35627 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nr1i3O35627 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1i3O35627 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nr1i3O35627 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1i3O35627 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1i3O35627 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1i3O35627 Gm14822-201ENSMUST00000122247 291 ntBASIC14.83□□□□□ -0.04
Nr1i3O35627 Gm11594-201ENSMUST00000122313 162 ntBASIC14.83□□□□□ -0.04
Nr1i3O35627 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1i3O35627 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1i3O35627 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.83□□□□□ -0.04
Nr1i3O35627 Gm10766-202ENSMUST00000194123 606 ntBASIC14.83□□□□□ -0.04
Nr1i3O35627 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Nr1i3O35627 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.83□□□□□ -0.04
Nr1i3O35627 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
Nr1i3O35627 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1i3O35627 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Nr1i3O35627 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1i3O35627 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1i3O35627 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1i3O35627 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.83□□□□□ -0.04
Nr1i3O35627 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1i3O35627 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nr1i3O35627 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1i3O35627 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1i3O35627 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nr1i3O35627 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.82□□□□□ -0.04
Nr1i3O35627 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms