Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npc1O35604 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npc1O35604 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npc1O35604 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Npc1O35604 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Npc1O35604 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npc1O35604 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.49□□□□□ -0.25
Npc1O35604 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npc1O35604 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.49□□□□□ -0.25
Npc1O35604 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npc1O35604 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npc1O35604 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Npc1O35604 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Npc1O35604 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Npc1O35604 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npc1O35604 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npc1O35604 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.49□□□□□ -0.25
Npc1O35604 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Npc1O35604 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.49□□□□□ -0.25
Npc1O35604 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.49□□□□□ -0.25
Npc1O35604 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.49□□□□□ -0.25
Npc1O35604 Gm19220-201ENSMUST00000222682 803 ntBASIC13.49□□□□□ -0.25
Npc1O35604 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npc1O35604 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Npc1O35604 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.49□□□□□ -0.25
Npc1O35604 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Npc1O35604 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.49□□□□□ -0.25
Npc1O35604 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npc1O35604 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npc1O35604 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Npc1O35604 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npc1O35604 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.48□□□□□ -0.25
Npc1O35604 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.48□□□□□ -0.25
Npc1O35604 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.48□□□□□ -0.25
Npc1O35604 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.48□□□□□ -0.25
Npc1O35604 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.48□□□□□ -0.25
Npc1O35604 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Gm28760-201ENSMUST00000185995 736 ntBASIC13.48□□□□□ -0.25
Npc1O35604 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.48□□□□□ -0.25
Npc1O35604 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.48□□□□□ -0.25
Npc1O35604 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.48□□□□□ -0.25
Npc1O35604 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Npc1O35604 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Acot6-202ENSMUST00000222921 3622 ntBASIC13.48□□□□□ -0.25
Npc1O35604 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Npc1O35604 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Npc1O35604 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.47□□□□□ -0.25
Npc1O35604 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.47□□□□□ -0.25
Npc1O35604 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
Npc1O35604 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.47□□□□□ -0.25
Npc1O35604 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Npc1O35604 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.47□□□□□ -0.25
Npc1O35604 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Npc1O35604 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.47□□□□□ -0.25
Npc1O35604 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.47□□□□□ -0.25
Npc1O35604 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Npc1O35604 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.47□□□□□ -0.25
Npc1O35604 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Npc1O35604 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms