Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Gm13674-201ENSMUST00000121276 823 ntBASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Gm22698-201ENSMUST00000175375 108 ntBASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Gm27682-201ENSMUST00000183930 110 ntBASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Gm18547-201ENSMUST00000192439 811 ntBASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Gm33571-201ENSMUST00000193271 657 ntBASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Trbv27-201ENSMUST00000193711 277 ntBASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Gm44889-201ENSMUST00000207674 1019 ntTSL 5 BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 AC122876.1-201ENSMUST00000217619 825 ntBASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.13■□□□□ 0.17
Nkx1-1G3UXB3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Gm25317-201ENSMUST00000116824 129 ntBASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Gm12696-201ENSMUST00000122361 905 ntBASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Gm37489-201ENSMUST00000191883 159 ntBASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Gm5850-201ENSMUST00000192923 1206 ntBASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Gm5717-201ENSMUST00000198243 1062 ntBASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Gm44422-201ENSMUST00000204142 1025 ntBASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Gm8952-201ENSMUST00000206828 1102 ntBASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 AC154361.1-201ENSMUST00000225694 745 ntBASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 AC170810.2-201ENSMUST00000228384 1232 ntBASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Rpl31-201ENSMUST00000086535 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Gm42995-201ENSMUST00000197047 1330 ntBASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Gm11342-203ENSMUST00000224879 1324 ntBASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Gm9742-202ENSMUST00000222219 1396 ntBASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx1-1G3UXB3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx1-1G3UXB3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx1-1G3UXB3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx1-1G3UXB3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Nkx1-1G3UXB3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx1-1G3UXB3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms