Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Gm2810-201ENSMUST00000118681 990 ntBASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh1F7BJK1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Gm8000-201ENSMUST00000188378 592 ntBASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 AA619741-201ENSMUST00000195095 646 ntBASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Gm44719-201ENSMUST00000206404 149 ntBASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh1F7BJK1 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms