Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TprF6ZDS4 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TprF6ZDS4 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TprF6ZDS4 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TprF6ZDS4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TprF6ZDS4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TprF6ZDS4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TprF6ZDS4 Gm4909-201ENSMUST00000118749 794 ntBASIC12.69□□□□□ -0.38
TprF6ZDS4 Gm13612-201ENSMUST00000119276 390 ntBASIC12.69□□□□□ -0.38
TprF6ZDS4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.69□□□□□ -0.38
TprF6ZDS4 Gm6152-201ENSMUST00000151704 340 ntBASIC12.69□□□□□ -0.38
TprF6ZDS4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.69□□□□□ -0.38
TprF6ZDS4 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TprF6ZDS4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TprF6ZDS4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TprF6ZDS4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TprF6ZDS4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TprF6ZDS4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
TprF6ZDS4 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.69□□□□□ -0.38
TprF6ZDS4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TprF6ZDS4 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.69□□□□□ -0.38
TprF6ZDS4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TprF6ZDS4 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TprF6ZDS4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
TprF6ZDS4 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TprF6ZDS4 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TprF6ZDS4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
TprF6ZDS4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TprF6ZDS4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TprF6ZDS4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TprF6ZDS4 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TprF6ZDS4 Gm2383-201ENSMUST00000181461 807 ntBASIC12.69□□□□□ -0.38
TprF6ZDS4 Gm37835-201ENSMUST00000193305 361 ntBASIC12.69□□□□□ -0.38
TprF6ZDS4 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TprF6ZDS4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TprF6ZDS4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.68□□□□□ -0.38
TprF6ZDS4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.68□□□□□ -0.38
TprF6ZDS4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TprF6ZDS4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.68□□□□□ -0.38
TprF6ZDS4 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.68□□□□□ -0.38
TprF6ZDS4 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.68□□□□□ -0.38
TprF6ZDS4 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.68□□□□□ -0.38
TprF6ZDS4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TprF6ZDS4 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
TprF6ZDS4 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.68□□□□□ -0.38
TprF6ZDS4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TprF6ZDS4 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.68□□□□□ -0.38
TprF6ZDS4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TprF6ZDS4 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TprF6ZDS4 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.68□□□□□ -0.38
TprF6ZDS4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.68□□□□□ -0.38
TprF6ZDS4 Gm13689-201ENSMUST00000119360 685 ntBASIC12.68□□□□□ -0.38
TprF6ZDS4 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.68□□□□□ -0.38
TprF6ZDS4 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.68□□□□□ -0.38
TprF6ZDS4 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.68□□□□□ -0.38
TprF6ZDS4 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 Gm3222-201ENSMUST00000071282 990 ntBASIC12.68□□□□□ -0.38
TprF6ZDS4 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TprF6ZDS4 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TprF6ZDS4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TprF6ZDS4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TprF6ZDS4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TprF6ZDS4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.67□□□□□ -0.38
TprF6ZDS4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TprF6ZDS4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TprF6ZDS4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TprF6ZDS4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TprF6ZDS4 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.67□□□□□ -0.38
TprF6ZDS4 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TprF6ZDS4 Gm13813-201ENSMUST00000120998 787 ntBASIC12.67□□□□□ -0.38
TprF6ZDS4 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TprF6ZDS4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.67□□□□□ -0.38
TprF6ZDS4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TprF6ZDS4 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.67□□□□□ -0.38
TprF6ZDS4 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TprF6ZDS4 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.67□□□□□ -0.38
TprF6ZDS4 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.67□□□□□ -0.38
TprF6ZDS4 Gm43058-201ENSMUST00000197645 625 ntBASIC12.67□□□□□ -0.38
TprF6ZDS4 Gm18473-201ENSMUST00000220543 868 ntBASIC12.67□□□□□ -0.38
TprF6ZDS4 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.67□□□□□ -0.38
TprF6ZDS4 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.67□□□□□ -0.38
TprF6ZDS4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms